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LIS / EHR Integration for Specimens

Who This Is For

Lab leaders, informatics teams, and IT who need specimen movement and custody events to appear in the LIS and EHR without adding steps for staff or risking data quality.

What Success Looks Like

  • Collection, departure, arrival, and accessioning events show up where teams already work
  • Events are concise, trustworthy, and easy to audit
  • PHI remains in the LIS while non-PHI keys power location and custody
  • Interfaces are reliable, duplicate-safe, and simple to support

The Problem We Are Actually Solving

Specimen tracking often lives in a separate tool, leaving the LIS and EHR blind to custody gaps. Manual updates are slow, error-prone, and hard to audit. The result is delay, re-work, and risk. You need automated, succinct events that plug into current systems and turn data into action.

What It Covers

This part explains how to write concise time and location events to the LIS order using standard interfaces, with smart retry logic that prevents duplicate records if there is an outage. It emphasizes a privacy model where PHI stays in the LIS, events carry non-PHI keys, and access is controlled and auditable.

Expected Outcomes

Specimen events become actionable signals in existing systems, improving data quality while keeping integration effort low.

Integrate Without Extra Steps

Events model: Define a small set of events tied to the LIS order number such as collected, departed unit, arrived receiving, accessioned, placed into storage or processing.

Identifiers: Use a non-PHI RFID key linked to the LIS order. Barcode remains the clinical label.

Interfaces: HL7 v2 messages, FHIR APIs, or REST endpoints through the hospital interface engine. Support buffering, retry, and duplicate protection.

Security and access: SSO, roles, and audit logs. Keep PHI within LIS and EHR.

Reliability: Queue and replay during outages, confirm delivery, and log every write with timestamps and source.

From Reader to Record: How the Flow Works

Capture: Fixed readers and handhelds generate movement events with time and place.

Normalize: Middleware maps reads to LIS orders, filters noise, and builds the concise event payload.

Deliver: Events are sent through the interface engine using the hospital’s approved pathways.

Confirm: Delivery is acknowledged and stored for audit. If delivery fails, messages are retried without creating duplicates.

Display: LIS worklists and dashboards surface the most recent meaningful state, while detail is available for audit.

Governance That Builds Trust

  • Clear ownership for interface changes and message schemas
  • Change control and versioning for event types and mappings
  • Routine review of exception queues and delivery success rates
  • Periodic access audits for service accounts and users

Rollout (Fast Start)

Phase 1:

  • Wire receiving arrival and accessioning events to the LIS on one high-volume route.
  • Turn on reconciliation in receiving and confirm events appear in LIS queues and worklists.

Phase 2:

  • Add unit departure events and route timers.
  • Expand to two more routes.
  • Validate end-to-end delivery and reporting.

What To Measure (KPIs)

  • Delivery success rate and average time from read to event in LIS
  • Percentage of LIS orders with complete custody events for the covered routes
  • Number of duplicate or out-of-order messages avoided through retry logic
  • Time from collection to accessioning by priority class
  • Exceptions resolved within target windows

How Integrations Support the Flow

Concise signals: Only write events that matter to workflow so staff see clear, usable updates.

Duplicate-safe logic: Retries do not create extra records.

PHI discipline: Tags carry non-PHI keys, while patient context lives only in LIS and EHR.

Auditability: Every write and retry is timestamped with source, route, and outcome.

FAQs

Integrating LIS (Laboratory Information System) and EHR (Electronic Health Record) for specimen tracking enhances data accuracy and reduces manual entry errors. This integration allows for real-time updates on specimen status, ensuring that all stakeholders have access to the most current information. It also streamlines workflows, minimizes delays in processing, and improves overall patient care by providing timely and reliable data. Additionally, it helps maintain compliance with regulatory standards by ensuring that all custody events are properly documented and auditable.
The integration prioritizes data privacy by keeping Protected Health Information (PHI) within the LIS while using non-PHI identifiers for tracking events. Access controls, such as Single Sign-On (SSO) and role-based permissions, are implemented to restrict access to sensitive data. Furthermore, audit logs track all interactions with the system, ensuring accountability and transparency. This layered security approach helps mitigate risks associated with data breaches and ensures compliance with healthcare regulations regarding patient information.
The integration enables tracking of various key specimen events, including collection, departure, arrival, accessioning, cold chain status, and storage placement. Each event is linked to a specific LIS order number, ensuring that all movements are accurately recorded and easily retrievable. This comprehensive tracking capability not only enhances operational efficiency but also provides a clear chain of custody, which is essential for maintaining the integrity of specimens throughout the testing process.
To ensure a smooth rollout of the LIS/EHR integration, organizations should adopt a phased approach. Start by implementing the integration on a high-volume route, focusing on key events like arrival and accessioning. Validate the system's performance and confirm that events appear correctly in LIS queues. Gradually expand to additional routes and event types while continuously monitoring performance metrics. Regular training and communication with staff will also help facilitate adoption and address any concerns during the transition.
Want an integration assessment or a pilot map?

Speak with the ID Integration team at (425) 438-2533.

Related Reading

Specimen Chain of Custody 101
 — building a reliable custody trail

Pre-Analytic Error Reduction
 — label practices and bedside steps that prevent re-work

Hospital Integrations Hub
—See interface patterns that keep data actionable, not noisy
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